PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OBART03G09470.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bHLH
Protein Properties Length: 361aa    MW: 39409.5 Da    PI: 6.3149
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OBART03G09470.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.68.4e-12188236355
                      HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
              HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h+ +Er RR++iN+++  L++l+P +    +k   Ka++L + ++Y++sLq
  OBART03G09470.1 188 NSHSLAERFRREKINERMKLLQDLVPGC----NKITGKAMMLDEIINYVQSLQ 236
                      58**************************....999*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000838.59E-12183240No hitNo description
SuperFamilySSF474591.31E-17183251IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.8E-18185252IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.796185235IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.7E-9188236IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.3E-10191241IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    Send to blast
MLLQQAFTLT VLFHCQSILT SFRHLLVPAA QQLKLQHQQK MVAIHWEAGG SSSGGLLMYS  60
PPCSAAASSQ GHCFAVGANQ LASLDLAMDF DEPILFPVHN ASLQEGIQFY NPTGDTQLSR  120
NMSIDKCLKG SKRKGSGEGS SSLHSQEETG EMPQRELSME HAGEKAGDAD ASREEYVHVR  180
AKRGQATNSH SLAERFRREK INERMKLLQD LVPGCNKITG KAMMLDEIIN YVQSLQRQVE  240
FLSMKLSTIS PELNSDLDLQ DILCSQDARS AFLGCSPQLS NAHPNLYRAA QQCLSPPGLY  300
GSVCVPNPAD VHLARAAHLA SFPQQRGLIW DEELRNIAPA GFASDAAGTS SLENSDSMKV  360
E
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2420030.0AK242003.1 Oryza sativa Japonica Group cDNA, clone: J075103H14, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015631335.10.0PREDICTED: transcription factor bHLH137 isoform X1
RefseqXP_015631334.10.0PREDICTED: transcription factor bHLH137 isoform X1
RefseqXP_015631333.10.0PREDICTED: transcription factor bHLH137 isoform X1
RefseqXP_015631332.10.0PREDICTED: transcription factor bHLH137 isoform X1
TrEMBLA0A0D3FFU30.0A0A0D3FFU3_9ORYZ; Uncharacterized protein
STRINGBGIOSGA011172-PA0.0(Oryza sativa Indica Group)
STRINGORGLA03G0090200.10.0(Oryza glaberrima)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP45362933
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.12e-48bHLH family protein